molpath.tools

molpath.tools

Open-source web tools for molecular pathology, clinical genomics, and diagnostic decision support.

Tools

Tumor Likelihood Tool live Cancer genomics
Rank likely cancer origins from somatic events

Submit mutations and copy-number alterations to rank probable tumor types using AACR GENIE prevalence priors. Posterior likelihoods guide differential diagnosis for cancers of unknown primary.

EC Molecular Subtyping live Gynecologic pathology
WHO 2020 endometrial cancer classification

Upload a MAF file to classify endometrial carcinomas into POLEmut, MMRd, p53abn, or NSMP. Integrates sequencing data with optional IHC results per WHO 2020 criteria and Swedish national guidelines.

Max Overtime live NGS analysis
Compare NGS variant data between two timepoints

Visualize and compare next-generation sequencing results across two timepoints — for instance baseline vs. relapse — to track clonal evolution and emerging resistance mutations.

ALASCCA-classify live Colorectal cancer
PI3K pathway classification for CRC aspirin eligibility

Classify PI3K pathway alterations in colorectal cancer to determine eligibility for adjuvant aspirin therapy per the ALASCCA trial (Martling et al., NEJM 2025). Covers Group A (PIK3CA hotspots) and Group B (PIK3CA, PIK3R1, PTEN) alterations.